Deprecated API


Contents
Deprecated Interfaces
org.apache.commons.math.linear.BigMatrix
          as of 2.0, replaced by FieldMatrix with a BigReal parameter 
org.apache.commons.math.ConvergingAlgorithm
          in 2.2 (to be removed in 3.0). The concept of "iteration" will be moved to a new IterativeAlgorithm. The concept of "accuracy" is currently is also contained in SimpleRealPointChecker and similar classes. 
org.apache.commons.math.estimation.EstimationProblem
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
org.apache.commons.math.estimation.Estimator
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
org.apache.commons.math.ode.jacobians.EventHandlerWithJacobians
          as of 2.2 the complete package is deprecated, it will be replaced in 3.0 by a completely rewritten implementation 
org.apache.commons.math.distribution.HasDensity
          to be removed in math 3.0 
org.apache.commons.math.ode.jacobians.ODEWithJacobians
          as of 2.2 the complete package is deprecated, it will be replaced in 3.0 by a completely rewritten implementation 
org.apache.commons.math.ode.jacobians.ParameterizedODE
          as of 2.2 the complete package is deprecated, it will be replaced in 3.0 by a completely rewritten implementation 
org.apache.commons.math.ode.jacobians.StepHandlerWithJacobians
          as of 2.2 the complete package is deprecated, it will be replaced in 3.0 by a completely rewritten implementation 
org.apache.commons.math.ode.jacobians.StepInterpolatorWithJacobians
          as of 2.2 the complete package is deprecated, it will be replaced in 3.0 by a completely rewritten implementation 
 

Deprecated Classes
org.apache.commons.math.estimation.AbstractEstimator
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
org.apache.commons.math.linear.BigMatrixImpl
          as of 2.0, replaced by Array2DRowFieldMatrix with a BigReal parameter 
org.apache.commons.math.analysis.BinaryFunction
          in 2.2 
org.apache.commons.math.ode.events.CombinedEventsManager
          as of 2.2, this class is not used anymore 
org.apache.commons.math.ConvergingAlgorithmImpl
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.estimation.EstimatedParameter
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
org.apache.commons.math.ode.jacobians.FirstOrderIntegratorWithJacobians
          as of 2.2 the complete package is deprecated, it will be replaced in 3.0 by a completely rewritten implementation 
org.apache.commons.math.estimation.GaussNewtonEstimator
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
org.apache.commons.math.estimation.LevenbergMarquardtEstimator
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
org.apache.commons.math.linear.RealMatrixImpl
          as of 2.0 replaced by Array2DRowRealMatrix 
org.apache.commons.math.estimation.SimpleEstimationProblem
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
org.apache.commons.math.analysis.interpolation.SmoothingBicubicSplineInterpolator
          This class does not perform smoothing; the name is thus misleading. Please use BicubicSplineInterpolator instead. If smoothing is desired, a tentative implementation is provided in class SmoothingPolynomialBicubicSplineInterpolator. This class will be removed in math 3.0. 
org.apache.commons.math.analysis.solvers.UnivariateRealSolverImpl
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.estimation.WeightedMeasurement
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
 

Deprecated Exceptions
org.apache.commons.math.DimensionMismatchException
          in 2.2 (to be removed in 3.0). Please use its equivalent from package org.apache.commons.math.exception. 
org.apache.commons.math.estimation.EstimationException
          as of 2.0, everything in package org.apache.commons.math.estimation has been deprecated and replaced by package org.apache.commons.math.optimization.general 
org.apache.commons.math.optimization.OptimizationException
          in 2.2 (to be removed in 3.0). 
 

Deprecated Fields
org.apache.commons.math.optimization.general.AbstractScalarDifferentiableOptimizer.checker
           
org.apache.commons.math.analysis.integration.UnivariateRealIntegratorImpl.f
          as of 2.0 the integrand function is passed as an argument to the UnivariateRealIntegrator.integrate(UnivariateRealFunction, double, double)method. 
org.apache.commons.math.analysis.solvers.UnivariateRealSolverImpl.f
          as of 2.0 the function to solve is passed as an argument to the UnivariateRealSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
org.apache.commons.math.optimization.general.AbstractScalarDifferentiableOptimizer.goal
           
org.apache.commons.math.optimization.general.AbstractScalarDifferentiableOptimizer.point
           
 

Deprecated Methods
org.apache.commons.math.ode.AbstractIntegrator.addEndTimeChecker(double, double, CombinedEventsManager)
          as of 2.2, this method is not used any more 
org.apache.commons.math.stat.Frequency.addValue(Integer)
          to be removed in math 3.0 
org.apache.commons.math.stat.Frequency.addValue(Object)
          use Frequency.addValue(Comparable) instead 
org.apache.commons.math.util.MathUtils.checkOrder(double[], int, boolean)
          as of 2.2 (please use the new checkOrder method). To be removed in 3.0. 
org.apache.commons.math.optimization.univariate.AbstractUnivariateRealOptimizer.checkResultComputed()
          in 2.2 (no alternative). 
org.apache.commons.math.optimization.univariate.AbstractUnivariateRealOptimizer.clearResult()
          in 2.2 (no alternative). 
org.apache.commons.math.optimization.univariate.AbstractUnivariateRealOptimizer.computeObjectiveValue(UnivariateRealFunction, double)
          in 2.2. Use this replacement instead. 
org.apache.commons.math.MathRuntimeException.createArithmeticException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.createArithmeticException(Localizable, Object...) 
org.apache.commons.math.MathRuntimeException.createArrayIndexOutOfBoundsException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.createArrayIndexOutOfBoundsException(Localizable, Object...) 
org.apache.commons.math.linear.MatrixUtils.createBigIdentityMatrix(int)
          since 2.0, replaced by MatrixUtils.createFieldIdentityMatrix(Field, int) 
org.apache.commons.math.linear.MatrixUtils.createBigMatrix(BigDecimal[][])
          since 2.0 replaced by MatrixUtils.createFieldMatrix(FieldElement[][]) 
org.apache.commons.math.linear.MatrixUtils.createBigMatrix(BigDecimal[][], boolean)
          since 2.0 replaced by MatrixUtils.createFieldMatrix(FieldElement[][]) 
org.apache.commons.math.linear.MatrixUtils.createBigMatrix(double[][])
          since 2.0 replaced by MatrixUtils.createFieldMatrix(FieldElement[][]) 
org.apache.commons.math.linear.MatrixUtils.createBigMatrix(String[][])
          since 2.0 replaced by MatrixUtils.createFieldMatrix(FieldElement[][]) 
org.apache.commons.math.linear.MatrixUtils.createColumnBigMatrix(BigDecimal[])
          since 2.0 replaced by MatrixUtils.createColumnFieldMatrix(FieldElement[]) 
org.apache.commons.math.linear.MatrixUtils.createColumnBigMatrix(double[])
          since 2.0 replaced by MatrixUtils.createColumnFieldMatrix(FieldElement[]) 
org.apache.commons.math.linear.MatrixUtils.createColumnBigMatrix(String[])
          since 2.0 replaced by MatrixUtils.createColumnFieldMatrix(FieldElement[]) 
org.apache.commons.math.MathRuntimeException.createConcurrentModificationException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.createConcurrentModificationException(Localizable, Object...) 
org.apache.commons.math.MathRuntimeException.createEOFException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.createEOFException(Localizable, Object...) 
org.apache.commons.math.MathRuntimeException.createIllegalArgumentException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.createIllegalArgumentException(Localizable, Object...) 
org.apache.commons.math.MathRuntimeException.createIllegalStateException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.createIllegalStateException(Localizable, Object...) 
org.apache.commons.math.MathRuntimeException.createNoSuchElementException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.createNoSuchElementException(Localizable, Object...) 
org.apache.commons.math.MathRuntimeException.createNullPointerException(Localizable, Object...)
          in 2.2. Checks for "null" must not be performed in Commons-Math. 
org.apache.commons.math.MathRuntimeException.createNullPointerException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.createNullPointerException(Localizable, Object...) 
org.apache.commons.math.MathRuntimeException.createParseException(int, String, Object...)
          as of 2.2 replaced by MathRuntimeException.createParseException(int, Localizable, Object...) 
org.apache.commons.math.linear.MatrixUtils.createRowBigMatrix(BigDecimal[])
          since 2.0 replaced by MatrixUtils.createRowFieldMatrix(FieldElement[]) 
org.apache.commons.math.linear.MatrixUtils.createRowBigMatrix(double[])
          since 2.0 replaced by MatrixUtils.createRowFieldMatrix(FieldElement[]) 
org.apache.commons.math.linear.MatrixUtils.createRowBigMatrix(String[])
          since 2.0 replaced by MatrixUtils.createRowFieldMatrix(FieldElement[]) 
org.apache.commons.math.MathRuntimeException.createUnsupportedOperationException(Localizable, Object...)
          in 2.2. Please use MathUnsupportedOperationException instead. 
org.apache.commons.math.distribution.ExponentialDistributionImpl.density(Double)
          - use density(double) 
org.apache.commons.math.distribution.ChiSquaredDistributionImpl.density(Double)
            
org.apache.commons.math.distribution.GammaDistributionImpl.density(Double)
            
org.apache.commons.math.distribution.NormalDistributionImpl.density(Double)
            
org.apache.commons.math.distribution.BetaDistributionImpl.density(Double)
            
org.apache.commons.math.util.MathUtils.equals(float[], float[])
          as of 2.2 this method considers that NaN == NaN. In release 3.0, the semantics will change in order to comply with IEEE754 where it is specified that NaN != NaN. New methods have been added for those cases where the old semantics is useful (see e.g. equalsIncludingNaN. 
org.apache.commons.math.util.MathUtils.equals(float, float)
          as of 2.2 his method considers that NaN == NaN. In release 3.0, the semantics will change in order to comply with IEEE754 where it is specified that NaN != NaN. New methods have been added for those cases wher the old semantics is useful (see e.g. equalsIncludingNaN. 
org.apache.commons.math.stat.inference.TestUtils.getChiSquareTest()
          2.2 will be removed in 3.0 
org.apache.commons.math.stat.Frequency.getCount(Object)
          replaced by Frequency.getCount(Comparable) as of 2.0 
org.apache.commons.math.stat.Frequency.getCumFreq(Object)
          replaced by Frequency.getCumFreq(Comparable) as of 2.0 
org.apache.commons.math.stat.Frequency.getCumPct(Object)
          replaced by Frequency.getCumPct(Comparable) as of 2.0 
org.apache.commons.math.linear.RealMatrix.getDeterminant()
          as of release 2.0, replaced by new LUDecompositionImpl(m).getDeterminant() 
org.apache.commons.math.linear.AbstractRealMatrix.getDeterminant()
           
org.apache.commons.math.stat.inference.TestUtils.getOneWayAnova()
          2.2 will be removed in 3.0 
org.apache.commons.math.MathRuntimeException.getPattern()
          as of 2.2 replaced by MathRuntimeException.getSpecificPattern() and MathRuntimeException.getGeneralPattern() 
org.apache.commons.math.MathException.getPattern()
          as of 2.2 replaced by MathException.getSpecificPattern() and MathException.getGeneralPattern() 
org.apache.commons.math.stat.Frequency.getPct(Object)
          replaced by Frequency.getPct(Comparable) as of 2.0 
org.apache.commons.math.analysis.solvers.LaguerreSolver.getPolynomialFunction()
          as of 2.0 the function is not stored anymore within the instance. 
org.apache.commons.math.linear.OpenMapRealVector.getSparcity()
          as of 2.2 replaced by the correctly spelled OpenMapRealVector.getSparsity() 
org.apache.commons.math.stat.inference.TestUtils.getTTest()
          2.2 will be removed in 3.0 
org.apache.commons.math.stat.inference.TestUtils.getUnknownDistributionChiSquareTest()
          2.2 will be removed in 3.0 
org.apache.commons.math.util.ResizableDoubleArray.getValues()
          replaced by ResizableDoubleArray.getInternalValues() as of 2.0 
org.apache.commons.math.analysis.integration.RombergIntegrator.integrate(double, double)
           
org.apache.commons.math.analysis.integration.SimpsonIntegrator.integrate(double, double)
           
org.apache.commons.math.analysis.integration.UnivariateRealIntegrator.integrate(double, double)
          replaced by UnivariateRealIntegrator.integrate(UnivariateRealFunction, double, double) since 2.0 
org.apache.commons.math.analysis.integration.TrapezoidIntegrator.integrate(double, double)
           
org.apache.commons.math.analysis.integration.LegendreGaussIntegrator.integrate(double, double)
           
org.apache.commons.math.linear.RealMatrix.inverse()
          as of release 2.0, replaced by new LUDecompositionImpl(m).getSolver().getInverse() 
org.apache.commons.math.linear.AbstractRealMatrix.inverse()
           
org.apache.commons.math.linear.RealMatrix.isSingular()
          as of release 2.0, replaced by the boolean negation of new LUDecompositionImpl(m).getSolver().isNonSingular() 
org.apache.commons.math.linear.AbstractRealMatrix.isSingular()
           
org.apache.commons.math.linear.AbstractRealMatrix.luDecompose()
          as of release 2.0, replaced by LUDecomposition 
org.apache.commons.math.linear.RealVector.mapAbs()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapAbsToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapAcos()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapAcosToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapAsin()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapAsinToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapAtan()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapAtanToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapCbrt()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapCbrtToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapCeil()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapCeilToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapCos()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapCosh()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapCoshToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapCosToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapExp()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapExpm1()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapExpm1ToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapExpToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapFloor()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapFloorToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapInv()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapInvToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapLog()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapLog10()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapLog10ToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapLog1p()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapLog1pToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapLogToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapPow(double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapPowToSelf(double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapRint()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapRintToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapSignum()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapSignumToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapSin()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapSinh()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapSinhToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapSinToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapSqrt()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapSqrtToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapTan()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapTanh()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapTanhToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapTanToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapUlp()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.linear.RealVector.mapUlpToSelf()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.util.MathUtils.nextAfter(double, double)
          as of 2.2, replaced by FastMath.nextAfter(double, double) which handles Infinities differently, and returns direction if d and direction compare equal. 
org.apache.commons.math.util.MathUtils.scalb(double, int)
          as of 2.2, replaced by FastMath.scalb(double, int) 
org.apache.commons.math.distribution.BetaDistribution.setAlpha(double)
          as of 2.1 
org.apache.commons.math.distribution.GammaDistributionImpl.setAlpha(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.GammaDistribution.setAlpha(double)
          as of v2.1 
org.apache.commons.math.distribution.BetaDistributionImpl.setAlpha(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.BetaDistribution.setBeta(double)
          as of 2.1 
org.apache.commons.math.distribution.GammaDistributionImpl.setBeta(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.GammaDistribution.setBeta(double)
          as of v2.1 
org.apache.commons.math.distribution.BetaDistributionImpl.setBeta(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.stat.inference.TestUtils.setChiSquareTest(ChiSquareTest)
          2.2 will be removed in 3.0 - not compatible with use from multiple threads 
org.apache.commons.math.stat.inference.TestUtils.setChiSquareTest(TTest)
          2.2 will be removed in 3.0 - not compatible with use from multiple threads 
org.apache.commons.math.distribution.ChiSquaredDistribution.setDegreesOfFreedom(double)
          as of v2.1 
org.apache.commons.math.distribution.TDistributionImpl.setDegreesOfFreedom(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.ChiSquaredDistributionImpl.setDegreesOfFreedom(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.TDistribution.setDegreesOfFreedom(double)
          as of v2.1 
org.apache.commons.math.distribution.FDistribution.setDenominatorDegreesOfFreedom(double)
          as of v2.1 
org.apache.commons.math.distribution.FDistributionImpl.setDenominatorDegreesOfFreedom(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.stat.regression.SimpleRegression.setDistribution(TDistribution)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.stat.inference.TTestImpl.setDistribution(TDistribution)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.distribution.ZipfDistributionImpl.setExponent(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.ZipfDistribution.setExponent(double)
          as of v2.1 
org.apache.commons.math.distribution.ChiSquaredDistributionImpl.setGamma(GammaDistribution)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.ExponentialDistributionImpl.setMean(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.NormalDistribution.setMean(double)
          as of v2.1 
org.apache.commons.math.distribution.ExponentialDistribution.setMean(double)
          as of v2.1 
org.apache.commons.math.distribution.PoissonDistributionImpl.setMean(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.PoissonDistribution.setMean(double)
          as of v2.1 
org.apache.commons.math.distribution.NormalDistributionImpl.setMean(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.CauchyDistribution.setMedian(double)
          as of v2.1 
org.apache.commons.math.distribution.CauchyDistributionImpl.setMedian(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.PoissonDistributionImpl.setNormal(NormalDistribution)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.ZipfDistributionImpl.setNumberOfElements(int)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.ZipfDistribution.setNumberOfElements(int)
          as of v2.1 
org.apache.commons.math.distribution.HypergeometricDistribution.setNumberOfSuccesses(int)
          as of v2.1 
org.apache.commons.math.distribution.HypergeometricDistributionImpl.setNumberOfSuccesses(int)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.PascalDistribution.setNumberOfSuccesses(int)
          as of v2.1 
org.apache.commons.math.distribution.PascalDistributionImpl.setNumberOfSuccesses(int)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.BinomialDistribution.setNumberOfTrials(int)
          as of v2.1 
org.apache.commons.math.distribution.BinomialDistributionImpl.setNumberOfTrials(int)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.FDistribution.setNumeratorDegreesOfFreedom(double)
          as of v2.1 
org.apache.commons.math.distribution.FDistributionImpl.setNumeratorDegreesOfFreedom(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.stat.inference.TestUtils.setOneWayAnova(OneWayAnova)
          2.2 will be removed in 3.0 - not compatible with use from multiple threads 
org.apache.commons.math.distribution.HypergeometricDistribution.setPopulationSize(int)
          as of v2.1 
org.apache.commons.math.distribution.HypergeometricDistributionImpl.setPopulationSize(int)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.PascalDistribution.setProbabilityOfSuccess(double)
          as of v2.1 
org.apache.commons.math.distribution.PascalDistributionImpl.setProbabilityOfSuccess(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.BinomialDistribution.setProbabilityOfSuccess(double)
          as of v2.1 
org.apache.commons.math.distribution.BinomialDistributionImpl.setProbabilityOfSuccess(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.optimization.univariate.AbstractUnivariateRealOptimizer.setResult(double, double, int)
          in 2.2 (no alternative). 
org.apache.commons.math.distribution.HypergeometricDistribution.setSampleSize(int)
          as of v2.1 
org.apache.commons.math.distribution.HypergeometricDistributionImpl.setSampleSize(int)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.CauchyDistribution.setScale(double)
          as of v2.1 
org.apache.commons.math.distribution.WeibullDistribution.setScale(double)
          as of v2.1 
org.apache.commons.math.distribution.CauchyDistributionImpl.setScale(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.WeibullDistributionImpl.setScale(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.WeibullDistribution.setShape(double)
          as of v2.1 
org.apache.commons.math.distribution.WeibullDistributionImpl.setShape(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.distribution.NormalDistribution.setStandardDeviation(double)
          as of v2.1 
org.apache.commons.math.distribution.NormalDistributionImpl.setStandardDeviation(double)
          as of 2.1 (class will become immutable in 3.0) 
org.apache.commons.math.stat.inference.TestUtils.setUnknownDistributionChiSquareTest(UnknownDistributionChiSquareTest)
          2.2 will be removed in 3.0 - not compatible with use from multiple threads 
org.apache.commons.math.analysis.solvers.LaguerreSolver.solve(Complex[], Complex)
          in 2.2. 
org.apache.commons.math.linear.RealMatrix.solve(double[])
          as of release 2.0, replaced by DecompositionSolver.solve(double[]) 
org.apache.commons.math.linear.AbstractRealMatrix.solve(double[])
           
org.apache.commons.math.analysis.solvers.SecantSolver.solve(double, double)
           
org.apache.commons.math.analysis.solvers.BisectionSolver.solve(double, double)
           
org.apache.commons.math.analysis.solvers.BrentSolver.solve(double, double)
           
org.apache.commons.math.analysis.solvers.MullerSolver.solve(double, double)
           
org.apache.commons.math.analysis.solvers.RiddersSolver.solve(double, double)
           
org.apache.commons.math.analysis.solvers.UnivariateRealSolver.solve(double, double)
          replaced by UnivariateRealSolver.solve(UnivariateRealFunction, double, double) since 2.0 
org.apache.commons.math.analysis.solvers.LaguerreSolver.solve(double, double)
           
org.apache.commons.math.analysis.solvers.NewtonSolver.solve(double, double)
           
org.apache.commons.math.analysis.solvers.SecantSolver.solve(double, double, double)
           
org.apache.commons.math.analysis.solvers.BisectionSolver.solve(double, double, double)
           
org.apache.commons.math.analysis.solvers.BrentSolver.solve(double, double, double)
           
org.apache.commons.math.analysis.solvers.MullerSolver.solve(double, double, double)
           
org.apache.commons.math.analysis.solvers.RiddersSolver.solve(double, double, double)
           
org.apache.commons.math.analysis.solvers.UnivariateRealSolver.solve(double, double, double)
          replaced by UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) since 2.0 
org.apache.commons.math.analysis.solvers.LaguerreSolver.solve(double, double, double)
           
org.apache.commons.math.analysis.solvers.NewtonSolver.solve(double, double, double)
           
org.apache.commons.math.linear.RealMatrix.solve(RealMatrix)
          as of release 2.0, replaced by DecompositionSolver.solve(RealMatrix) 
org.apache.commons.math.linear.AbstractRealMatrix.solve(RealMatrix)
           
org.apache.commons.math.analysis.solvers.SecantSolver.solve(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.BisectionSolver.solve(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.BrentSolver.solve(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.MullerSolver.solve(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.RiddersSolver.solve(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.UnivariateRealSolver.solve(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.LaguerreSolver.solve(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.NewtonSolver.solve(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.SecantSolver.solve(UnivariateRealFunction, double, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.BisectionSolver.solve(UnivariateRealFunction, double, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.BrentSolver.solve(UnivariateRealFunction, double, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.MullerSolver.solve(UnivariateRealFunction, double, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.RiddersSolver.solve(UnivariateRealFunction, double, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.LaguerreSolver.solve(UnivariateRealFunction, double, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.NewtonSolver.solve(UnivariateRealFunction, double, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.MullerSolver.solve2(double, double)
          replaced by MullerSolver.solve2(UnivariateRealFunction, double, double) since 2.0 
org.apache.commons.math.analysis.solvers.MullerSolver.solve2(UnivariateRealFunction, double, double)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.LaguerreSolver.solveAll(Complex[], Complex)
          in 2.2. 
org.apache.commons.math.analysis.solvers.LaguerreSolver.solveAll(double[], double)
          in 2.2. 
 

Deprecated Constructors
org.apache.commons.math.optimization.univariate.AbstractUnivariateRealOptimizer(int, double)
          in 2.2. Please use the "setter" methods to assign meaningful values to the maximum numbers of iterations and evaluations, and to the absolute and relative accuracy thresholds. 
org.apache.commons.math.analysis.solvers.BisectionSolver(UnivariateRealFunction)
          as of 2.0 the function to solve is passed as an argument to the BisectionSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
org.apache.commons.math.analysis.solvers.BrentSolver()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.BrentSolver(UnivariateRealFunction)
          as of 2.0 the function to solve is passed as an argument to the BrentSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
org.apache.commons.math.distribution.ChiSquaredDistributionImpl(double, GammaDistribution)
          as of 2.1 (to avoid possibly inconsistent state, the "GammaDistribution" will be instantiated internally) 
org.apache.commons.math.ConvergenceException(String, Object...)
          as of 2.2 replaced by ConvergenceException.ConvergenceException(Localizable, Object...) 
org.apache.commons.math.ConvergenceException(Throwable, String, Object...)
          as of 2.2 replaced by ConvergenceException.ConvergenceException(Throwable, Localizable, Object...) 
org.apache.commons.math.ConvergingAlgorithmImpl()
          in 2.2 (to be removed as soon as the single non-default one has been removed). 
org.apache.commons.math.ConvergingAlgorithmImpl(int, double)
          in 2.2. Derived classes should use the "setter" methods in order to assign meaningful values to all the instances variables. 
org.apache.commons.math.ode.events.EventException(String, Object...)
          as of 2.2 replaced by EventException.EventException(Localizable, Object...) 
org.apache.commons.math.ode.IntegratorException(String, Object...)
          as of 2.2 replaced by IntegratorException.IntegratorException(Localizable, Object...) 
org.apache.commons.math.linear.InvalidMatrixException(String, Object...)
          since 2.2 replaced by InvalidMatrixException.InvalidMatrixException(Localizable, Object...) 
org.apache.commons.math.analysis.solvers.LaguerreSolver()
          in 2.2 (to be removed in 3.0) 
org.apache.commons.math.analysis.solvers.LaguerreSolver(UnivariateRealFunction)
          as of 2.0 the function to solve is passed as an argument to the LaguerreSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
org.apache.commons.math.MathException(String, Object...)
          as of 2.2 replaced by MathException.MathException(Localizable, Object...) 
org.apache.commons.math.MathException(Throwable, String, Object...)
          as of 2.2 replaced by MathException.MathException(Throwable, Localizable, Object...) 
org.apache.commons.math.MathRuntimeException(String, Object...)
          as of 2.2 replaced by MathRuntimeException.MathRuntimeException(Localizable, Object...) 
org.apache.commons.math.MathRuntimeException(Throwable, String, Object...)
          as of 2.2 replaced by MathRuntimeException.MathRuntimeException(Throwable, Localizable, Object...) 
org.apache.commons.math.linear.MatrixIndexException(String, Object...)
          as of 2.2 replaced by MatrixIndexException.MatrixIndexException(Localizable, Object...) 
org.apache.commons.math.MaxEvaluationsExceededException(int, String, Object...)
          as of 2.2 replaced by MaxEvaluationsExceededException.MaxEvaluationsExceededException(int, Localizable, Object...) 
org.apache.commons.math.MaxIterationsExceededException(int, String, Object...)
          as of 2.2 replaced by MaxIterationsExceededException.MaxIterationsExceededException(int, Localizable, Object...) 
org.apache.commons.math.analysis.solvers.MullerSolver()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.MullerSolver(UnivariateRealFunction)
          as of 2.0 the function to solve is passed as an argument to the MullerSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
org.apache.commons.math.analysis.solvers.NewtonSolver()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.NewtonSolver(DifferentiableUnivariateRealFunction)
          as of 2.0 the function to solve is passed as an argument to the NewtonSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
org.apache.commons.math.geometry.NotARotationMatrixException(String, Object...)
          as of 2.2 replaced by NotARotationMatrixException.NotARotationMatrixException(Localizable, Object...) 
org.apache.commons.math.optimization.OptimizationException(String, Object...)
          as of 2.2 replaced by OptimizationException.OptimizationException(Localizable, Object...) 
org.apache.commons.math.distribution.PoissonDistributionImpl(double, NormalDistribution)
          as of 2.1 (to avoid possibly inconsistent state, the "NormalDistribution" will be instantiated internally) 
org.apache.commons.math.analysis.solvers.RiddersSolver()
          in 2.2 
org.apache.commons.math.analysis.solvers.RiddersSolver(UnivariateRealFunction)
          as of 2.0 the function to solve is passed as an argument to the RiddersSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
org.apache.commons.math.analysis.integration.RombergIntegrator(UnivariateRealFunction)
          as of 2.0 the integrand function is passed as an argument to the RombergIntegrator.integrate(UnivariateRealFunction, double, double)method. 
org.apache.commons.math.analysis.solvers.SecantSolver()
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.solvers.SecantSolver(UnivariateRealFunction)
          as of 2.0 the function to solve is passed as an argument to the SecantSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
org.apache.commons.math.stat.regression.SimpleRegression(TDistribution)
          in 2.2 (to be removed in 3.0). Please use the other constructor instead. 
org.apache.commons.math.analysis.integration.SimpsonIntegrator(UnivariateRealFunction)
          as of 2.0 the integrand function is passed as an argument to the SimpsonIntegrator.integrate(UnivariateRealFunction, double, double)method. 
org.apache.commons.math.analysis.integration.TrapezoidIntegrator(UnivariateRealFunction)
          as of 2.0 the integrand function is passed as an argument to the TrapezoidIntegrator.integrate(UnivariateRealFunction, double, double)method. 
org.apache.commons.math.stat.inference.TTestImpl(TDistribution)
          in 2.2 (to be removed in 3.0). 
org.apache.commons.math.analysis.integration.UnivariateRealIntegratorImpl(UnivariateRealFunction, int)
          as of 2.0 the integrand function is passed as an argument to the UnivariateRealIntegrator.integrate(UnivariateRealFunction, double, double)method. 
org.apache.commons.math.analysis.solvers.UnivariateRealSolverImpl(UnivariateRealFunction, int, double)
          as of 2.0 the function to solve is passed as an argument to the UnivariateRealSolver.solve(UnivariateRealFunction, double, double) or UnivariateRealSolver.solve(UnivariateRealFunction, double, double, double) method. 
 



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