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1   /*
2    * Licensed to the Apache Software Foundation (ASF) under one or more
3    * contributor license agreements.  See the NOTICE file distributed with
4    * this work for additional information regarding copyright ownership.
5    * The ASF licenses this file to You under the Apache License, Version 2.0
6    * (the "License"); you may not use this file except in compliance with
7    * the License.  You may obtain a copy of the License at
8    *
9    *      http://www.apache.org/licenses/LICENSE-2.0
10   *
11   * Unless required by applicable law or agreed to in writing, software
12   * distributed under the License is distributed on an "AS IS" BASIS,
13   * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14   * See the License for the specific language governing permissions and
15   * limitations under the License.
16   */
17  package org.apache.commons.math4.legacy.fitting;
18  
19  import java.util.ArrayList;
20  import java.util.List;
21  import java.util.Random;
22  
23  import org.apache.commons.numbers.angle.Angle;
24  import org.apache.commons.math4.legacy.analysis.function.HarmonicOscillator;
25  import org.apache.commons.math4.legacy.exception.MathIllegalStateException;
26  import org.apache.commons.math4.legacy.exception.NumberIsTooSmallException;
27  import org.apache.commons.math4.core.jdkmath.JdkMath;
28  import org.junit.Assert;
29  import org.junit.Test;
30  
31  public class HarmonicCurveFitterTest {
32      /**
33       * Zero points is not enough observed points.
34       */
35      @Test(expected=NumberIsTooSmallException.class)
36      public void testPreconditions1() {
37          HarmonicCurveFitter.create().fit(new WeightedObservedPoints().toList());
38      }
39  
40      @Test
41      public void testNoError() {
42          final double a = 0.2;
43          final double w = 3.4;
44          final double p = 4.1;
45          final HarmonicOscillator f = new HarmonicOscillator(a, w, p);
46  
47          final WeightedObservedPoints points = new WeightedObservedPoints();
48          for (double x = 0.0; x < 1.3; x += 0.01) {
49              points.add(1, x, f.value(x));
50          }
51  
52          final SimpleCurveFitter fitter = HarmonicCurveFitter.create();
53          final double[] fitted = fitter.fit(points.toList());
54          Assert.assertEquals(a, fitted[0], 1.0e-13);
55          Assert.assertEquals(w, fitted[1], 1.0e-13);
56          Assert.assertEquals(p, Angle.Rad.WITHIN_0_AND_2PI.applyAsDouble(fitted[2]), 1e-13);
57  
58          final HarmonicOscillator ff = new HarmonicOscillator(fitted[0], fitted[1], fitted[2]);
59          for (double x = -1.0; x < 1.0; x += 0.01) {
60              Assert.assertTrue(JdkMath.abs(f.value(x) - ff.value(x)) < 1e-13);
61          }
62      }
63  
64      @Test
65      public void test1PercentError() {
66          final Random randomizer = new Random(64925784252L);
67          final double a = 0.2;
68          final double w = 3.4;
69          final double p = 4.1;
70          final HarmonicOscillator f = new HarmonicOscillator(a, w, p);
71  
72          final WeightedObservedPoints points = new WeightedObservedPoints();
73          for (double x = 0.0; x < 10.0; x += 0.1) {
74              points.add(1, x, f.value(x) + 0.01 * randomizer.nextGaussian());
75          }
76  
77          final SimpleCurveFitter fitter = HarmonicCurveFitter.create();
78          final double[] fitted = fitter.fit(points.toList());
79          Assert.assertEquals(a, fitted[0], 7.6e-4);
80          Assert.assertEquals(w, fitted[1], 2.7e-3);
81          Assert.assertEquals(p, Angle.Rad.WITHIN_0_AND_2PI.applyAsDouble(fitted[2]), 1.3e-2);
82      }
83  
84      @Test
85      public void testTinyVariationsData() {
86          final Random randomizer = new Random(64925784252L);
87  
88          final WeightedObservedPoints points = new WeightedObservedPoints();
89          for (double x = 0.0; x < 10.0; x += 0.1) {
90              points.add(1, x, 1e-7 * randomizer.nextGaussian());
91          }
92  
93          final SimpleCurveFitter fitter = HarmonicCurveFitter.create();
94          fitter.fit(points.toList());
95  
96          // This test serves to cover the part of the code of "guessAOmega"
97          // when the algorithm using integrals fails.
98      }
99  
100     @Test
101     public void testInitialGuess() {
102         final Random randomizer = new Random(45314242L);
103         final double a = 0.2;
104         final double w = 3.4;
105         final double p = 4.1;
106         final HarmonicOscillator f = new HarmonicOscillator(a, w, p);
107 
108         final WeightedObservedPoints points = new WeightedObservedPoints();
109         for (double x = 0.0; x < 10.0; x += 0.1) {
110             points.add(1, x, f.value(x) + 0.01 * randomizer.nextGaussian());
111         }
112 
113         final SimpleCurveFitter fitter = HarmonicCurveFitter.create()
114             .withStartPoint(new double[] { 0.15, 3.6, 4.5 });
115         final double[] fitted = fitter.fit(points.toList());
116         Assert.assertEquals(a, fitted[0], 1.2e-3);
117         Assert.assertEquals(w, fitted[1], 3.3e-3);
118         Assert.assertEquals(p, Angle.Rad.WITHIN_0_AND_2PI.applyAsDouble(fitted[2]), 1.7e-2);
119     }
120 
121     @Test
122     public void testUnsorted() {
123         Random randomizer = new Random(64925784252L);
124         final double a = 0.2;
125         final double w = 3.4;
126         final double p = 4.1;
127         final HarmonicOscillator f = new HarmonicOscillator(a, w, p);
128 
129         // Build a regularly spaced array of measurements.
130         final int size = 100;
131         final double[] xTab = new double[size];
132         final double[] yTab = new double[size];
133         for (int i = 0; i < size; i++) {
134             xTab[i] = 0.1 * i;
135             yTab[i] = f.value(xTab[i]) + 0.01 * randomizer.nextGaussian();
136         }
137 
138         // shake it
139         for (int i = 0; i < size; i++) {
140             int i1 = randomizer.nextInt(size);
141             int i2 = randomizer.nextInt(size);
142             double xTmp = xTab[i1];
143             double yTmp = yTab[i1];
144             xTab[i1] = xTab[i2];
145             yTab[i1] = yTab[i2];
146             xTab[i2] = xTmp;
147             yTab[i2] = yTmp;
148         }
149 
150         // Pass it to the fitter.
151         final WeightedObservedPoints points = new WeightedObservedPoints();
152         for (int i = 0; i < size; ++i) {
153             points.add(1, xTab[i], yTab[i]);
154         }
155 
156         final SimpleCurveFitter fitter = HarmonicCurveFitter.create();
157         final double[] fitted = fitter.fit(points.toList());
158         Assert.assertEquals(a, fitted[0], 7.6e-4);
159         Assert.assertEquals(w, fitted[1], 3.5e-3);
160         Assert.assertEquals(p, Angle.Rad.WITHIN_0_AND_2PI.applyAsDouble(fitted[2]), 1.5e-2);
161     }
162 
163     @Test(expected=MathIllegalStateException.class)
164     public void testMath844() {
165         final double[] y = { 0, 1, 2, 3, 2, 1,
166                              0, -1, -2, -3, -2, -1,
167                              0, 1, 2, 3, 2, 1,
168                              0, -1, -2, -3, -2, -1,
169                              0, 1, 2, 3, 2, 1, 0 };
170         final List<WeightedObservedPoint> points = new ArrayList<>();
171         for (int i = 0; i < y.length; i++) {
172             points.add(new WeightedObservedPoint(1, i, y[i]));
173         }
174 
175         // The guesser fails because the function is far from an harmonic
176         // function: It is a triangular periodic function with amplitude 3
177         // and period 12, and all sample points are taken at integer abscissae
178         // so function values all belong to the integer subset {-3, -2, -1, 0,
179         // 1, 2, 3}.
180         new HarmonicCurveFitter.ParameterGuesser().guess(points);
181     }
182 }