1 /*
2 * Licensed to the Apache Software Foundation (ASF) under one or more
3 * contributor license agreements. See the NOTICE file distributed with
4 * this work for additional information regarding copyright ownership.
5 * The ASF licenses this file to You under the Apache License, Version 2.0
6 * (the "License"); you may not use this file except in compliance with
7 * the License. You may obtain a copy of the License at
8 *
9 * http://www.apache.org/licenses/LICENSE-2.0
10 *
11 * Unless required by applicable law or agreed to in writing, software
12 * distributed under the License is distributed on an "AS IS" BASIS,
13 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
14 * See the License for the specific language governing permissions and
15 * limitations under the License.
16 */
17 package org.apache.commons.math4.legacy.stat.descriptive.moment;
18
19 import org.apache.commons.math4.legacy.exception.MathIllegalArgumentException;
20 import org.apache.commons.math4.legacy.exception.MathIllegalStateException;
21 import org.apache.commons.math4.legacy.exception.NullArgumentException;
22 import org.apache.commons.math4.legacy.exception.util.LocalizedFormats;
23 import org.apache.commons.math4.legacy.stat.descriptive.AbstractStorelessUnivariateStatistic;
24 import org.apache.commons.math4.legacy.stat.descriptive.StorelessUnivariateStatistic;
25 import org.apache.commons.math4.legacy.stat.descriptive.summary.SumOfLogs;
26 import org.apache.commons.math4.core.jdkmath.JdkMath;
27
28 /**
29 * Returns the <a href="http://www.xycoon.com/geometric_mean.htm">
30 * geometric mean </a> of the available values.
31 * <p>
32 * Uses a {@link SumOfLogs} instance to compute sum of logs and returns
33 * <code> exp( 1/n (sum of logs) ).</code> Therefore, </p>
34 * <ul>
35 * <li>If any of values are {@code < 0}, the result is <code>NaN.</code></li>
36 * <li>If all values are non-negative and less than
37 * <code>Double.POSITIVE_INFINITY</code>, but at least one value is 0, the
38 * result is <code>0.</code></li>
39 * <li>If both <code>Double.POSITIVE_INFINITY</code> and
40 * <code>Double.NEGATIVE_INFINITY</code> are among the values, the result is
41 * <code>NaN.</code></li>
42 * </ul>
43 * <p>
44 * <strong>Note that this implementation is not synchronized.</strong> If
45 * multiple threads access an instance of this class concurrently, and at least
46 * one of the threads invokes the <code>increment()</code> or
47 * <code>clear()</code> method, it must be synchronized externally.</p>
48 */
49 public class GeometricMean extends AbstractStorelessUnivariateStatistic {
50 /** Wrapped SumOfLogs instance. */
51 private StorelessUnivariateStatistic sumOfLogs;
52
53 /**
54 * Create a GeometricMean instance.
55 */
56 public GeometricMean() {
57 sumOfLogs = new SumOfLogs();
58 }
59
60 /**
61 * Copy constructor, creates a new {@code GeometricMean} identical
62 * to the {@code original}.
63 *
64 * @param original the {@code GeometricMean} instance to copy
65 * @throws NullArgumentException if original is null
66 */
67 public GeometricMean(GeometricMean original) throws NullArgumentException {
68 super();
69 copy(original, this);
70 }
71
72 /**
73 * Create a GeometricMean instance using the given SumOfLogs instance.
74 * @param sumOfLogs sum of logs instance to use for computation.
75 */
76 public GeometricMean(SumOfLogs sumOfLogs) {
77 this.sumOfLogs = sumOfLogs;
78 }
79
80 /**
81 * {@inheritDoc}
82 */
83 @Override
84 public GeometricMean copy() {
85 GeometricMean result = new GeometricMean();
86 // no try-catch or advertised exception because args guaranteed non-null
87 copy(this, result);
88 return result;
89 }
90
91 /**
92 * {@inheritDoc}
93 */
94 @Override
95 public void increment(final double d) {
96 sumOfLogs.increment(d);
97 }
98
99 /**
100 * {@inheritDoc}
101 */
102 @Override
103 public double getResult() {
104 if (sumOfLogs.getN() > 0) {
105 return JdkMath.exp(sumOfLogs.getResult() / sumOfLogs.getN());
106 } else {
107 return Double.NaN;
108 }
109 }
110
111 /**
112 * {@inheritDoc}
113 */
114 @Override
115 public void clear() {
116 sumOfLogs.clear();
117 }
118
119 /**
120 * Returns the geometric mean of the entries in the specified portion
121 * of the input array.
122 * <p>
123 * See {@link GeometricMean} for details on the computing algorithm.</p>
124 * <p>
125 * Throws <code>IllegalArgumentException</code> if the array is null.</p>
126 *
127 * @param values input array containing the values
128 * @param begin first array element to include
129 * @param length the number of elements to include
130 * @return the geometric mean or Double.NaN if length = 0 or
131 * any of the values are <= 0.
132 * @throws MathIllegalArgumentException if the input array is null or the array
133 * index parameters are not valid
134 */
135 @Override
136 public double evaluate(final double[] values, final int begin, final int length)
137 throws MathIllegalArgumentException {
138 return JdkMath.exp(sumOfLogs.evaluate(values, begin, length) / length);
139 }
140
141 /**
142 * {@inheritDoc}
143 */
144 @Override
145 public long getN() {
146 return sumOfLogs.getN();
147 }
148
149 /**
150 * <p>Sets the implementation for the sum of logs.</p>
151 * <p>This method must be activated before any data has been added - i.e.,
152 * before {@link #increment(double) increment} has been used to add data;
153 * otherwise an IllegalStateException will be thrown.</p>
154 *
155 * @param sumLogImpl the StorelessUnivariateStatistic instance to use
156 * for computing the log sum
157 * @throws MathIllegalStateException if data has already been added
158 * (i.e if n > 0)
159 */
160 public void setSumLogImpl(StorelessUnivariateStatistic sumLogImpl)
161 throws MathIllegalStateException {
162 checkEmpty();
163 this.sumOfLogs = sumLogImpl;
164 }
165
166 /**
167 * Returns the currently configured sum of logs implementation.
168 *
169 * @return the StorelessUnivariateStatistic implementing the log sum
170 */
171 public StorelessUnivariateStatistic getSumLogImpl() {
172 return sumOfLogs;
173 }
174
175 /**
176 * Copies source to dest.
177 * <p>Neither source nor dest can be null.</p>
178 *
179 * @param source GeometricMean to copy
180 * @param dest GeometricMean to copy to
181 * @throws NullArgumentException if either source or dest is null
182 */
183 public static void copy(GeometricMean source, GeometricMean dest)
184 throws NullArgumentException {
185 NullArgumentException.check(source);
186 NullArgumentException.check(dest);
187 dest.sumOfLogs = source.sumOfLogs.copy();
188 }
189
190 /**
191 * Throws MathIllegalStateException if n > 0.
192 * @throws MathIllegalStateException if data has been added to this statistic
193 */
194 private void checkEmpty() throws MathIllegalStateException {
195 if (getN() > 0) {
196 throw new MathIllegalStateException(
197 LocalizedFormats.VALUES_ADDED_BEFORE_CONFIGURING_STATISTIC,
198 getN());
199 }
200 }
201 }